I want to thank everyone who posted comments. Nearly all were very useful (even if all they did was reaffirm that what someone else had said was a sound point of view). I decided in the end to let the player who wanted to base the character on herself go forward, however I did make sure (via subtle questioning) that she would be not only able to handle negative circumstances but also to make sure that she would not have an idealized version of herself. Actually she came up with more negative traits and beginnings of aspects than she did wholly positive ones. I am much more at ease with the idea of her character.
I am still a little uneasy about the apprentice issue as there is no clear cut template for the apprentice. I know it says that it is a less powerful wizard but that is vague. Can someone point me to a post of a completed character that they feel would be at the "Waist-Deep" power level as an apprentice wizard. That would be a huge help.
The second player wants to play a native american medicine man apprentice. I am not sure if I should encourage him to use the wizard template as well or if the focused spellcaster or even sorcerer would be best as a starting point. If anyone has any suggestions with that I am open to those as well.
We have chosen to use our home town (I heard what you all said about the possible difficulties of arguments), we have many locations and faces in mind and have themes and threats, our next step is to work on aspects for the city. It seems like the aspects are what hang our group up the most. We are only able to work on it for a couple hours at a time so it is being spread out over a number of days, however this is letting us come up with ideas and then go and get the research material to flesh out those ideas. A good and bad point there.
Anyway I am welcoming all feedback and once we have completed forms I am interested in posting them to get feedback on the final result if any are willing to do so.
As an aside, I thought this would be funny to share:
About two days after buying the books and starting to read them, my desktop computer's power supply went out (not a big deal as they are sometimes the most common things to go out), anyway within a day I had the replacement and installed it. About 48 hours after that I was informed that the video drivers were out of date and proceeded to upgrade them. After doing so my main monitor went blank (I have two video cards and three screens). I got concerned but the computer wanted to do a restart to complete the driver update so I wondered if maybe it would correct itself. I let it reboot and then the computer would power on and nothing would show on any monitor (this issue is still being worked on). I could attribute it to a computer just being flaky as they can be at times.
However then about a week later I had been using my laptop, plugged into my monitor to make for a more comfortable viewing position, and I get a blue screen of death. When the laptop restarts it says that there was no system disk. I started to freak out and went into the on-board diagnostics and it said I had no hard drive.

Come to find out the laptop hot overheated and the hard drive became a little loose.
The laptop happened to go out while researching something during a planning session for our DFRPG game. Now everyone is "convinced" that I am a burgeoning wizard who is fouling up my machines with my aura. At the beginning of each of our sessions now there is a running joke about keeping the laptops away from me.
I felt it was funny and wanted to share.